Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110954658Transmembrane protein 106A. (239 aa)    
Predicted Functional Partners:
ENSAPOP00000010144
Fibronectin type-III domain-containing protein.
     
  0.715
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.685
mst1r
Macrophage stimulating 1 receptor b.
    
  0.685
LOC110972771
Uncharacterized protein.
    
  0.685
fam110b
Family with sequence similarity 110 member B.
      
 0.654
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.622
mcrs1
Microspherule protein 1.
    
  0.600
tex30
Testis expressed 30.
    
 0.555
kansl3
KAT8 regulatory NSL complex subunit 3.
    
 0.555
arhgap25
Rho GTPase activating protein 25.
      
 0.543
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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