STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
capn3Calpain 3a, (p94); Belongs to the peptidase C2 family. (641 aa)    
Predicted Functional Partners:
ENSAPOP00000021704
Uncharacterized protein.
   
 0.846
LOC110958170
Calpain, small subunit 1 b.
   
0.728
CAPNS1
Calpain small subunit 1.
   
0.728
ENSAPOP00000030863
Intersectin 2a.
   
 
  0.648
LOC110950796
Intersectin 2b.
   
 
  0.648
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
 
 0.588
tln2
Talin 2b.
    
 0.582
LOC110961362
Talin 2a.
    
 0.582
tlnrd1
Talin rod domain containing 1.
    
 0.582
pef1
Penta-EF-hand domain containing 1.
   
0.582
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.