Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
capn3Calpain 3a, (p94); Belongs to the peptidase C2 family. (641 aa)    
Predicted Functional Partners:
ENSAPOP00000021704
Uncharacterized protein.
   
 0.897
LOC110960233
Calpain 3b; Belongs to the peptidase C2 family.
     
  0.865
LOC110958170
Calpain, small subunit 1 b.
   
 0.772
CAPNS1
Calpain small subunit 1.
   
 0.772
LOC110960072
Caspase b, like; Belongs to the peptidase C14A family.
    
 0.722
LOC110962959
Zgc:153993.
   
 
 0.709
bax
BCL2 associated X, apoptosis regulator a.
     
 0.708
LOC110952403
Uncharacterized protein.
     
 0.706
ENSAPOP00000015126
BH3 interacting domain death agonist.
     
  0.703
tln2
Talin 2b.
    
 0.567
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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