Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hpnHepsin; Belongs to the peptidase S1 family. (427 aa)    
Predicted Functional Partners:
hgf
Hepatocyte growth factor b; Belongs to the peptidase S1 family. Plasminogen subfamily.
    
 0.659
LOC110948568
Hepatocyte growth factor a; Belongs to the peptidase S1 family. Plasminogen subfamily.
    
 0.659
mst1
Macrophage stimulating 1; Belongs to the peptidase S1 family. Plasminogen subfamily.
    
 0.659
spint1
Serine peptidase inhibitor, Kunitz type 1 a.
    
 0.634
LOC110966621
Uncharacterized protein.
    
 0.634
ENSAPOP00000025244
BPTI/Kunitz inhibitor domain-containing protein.
    
 0.634
nme9
NME/NM23 family member 8; Belongs to the NDK family.
   
 0.629
agrn
Agrin.
   
 
 0.611
cdc73
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).
    
  0.604
LOC110969707
Neutral ceramidase.
      
 0.600
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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