STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3RF3SH3 domain containing ring finger 3. (844 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
 0.891
vta1
Vesicle (multivesicular body) trafficking 1.
    
   0.843
xk
XK-related protein.
   
 0.837
xkrx
XK-related protein.
   
 0.837
NOX4
NADPH oxidase 4.
   
 0.837
LOC110957784
Cytochrome b-245, beta polypeptide (chronic granulomatous disease).
   
 0.837
nox5
NADPH oxidase, EF-hand calcium binding domain 5.
   
 0.837
nox1
NADPH oxidase 1.
   
 0.837
LOC110950354
Dual oxidase.
   
 0.837
gak
Cyclin G associated kinase.
   
  0.757
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.