Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110951745T-cell acute lymphocytic leukemia 1. (387 aa)    
Predicted Functional Partners:
lmo2
LIM domain only 2 (rhombotin-like 1).
   
 0.989
LOC110947951
GATA binding protein 1a.
   
 0.983
ldb1
LIM-domain binding 1b.
    
 0.945
LOC110959119
LIM domain binding 1a.
    
 0.945
LOC110956568
LIM domain binding 2a.
    
 0.927
LOC110963107
Runt-related transcription factor.
    
 0.924
LOC110949941
LIM domain only 1.
    
 0.913
lmo3
LIM domain only 3.
    
 0.913
spi1
Spi-1 proto-oncogene b.
  
 0.908
LOC110955291
GATA binding protein 2a.
   
 0.877
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.