Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110948257Uncharacterized protein. (339 aa)    
Predicted Functional Partners:
ENSAPOP00000005471
Protein kinase domain-containing protein.
    
  0.537
ENSAPOP00000028536
Ig-like domain-containing protein.
    
  0.537
LOC110957895
Uncharacterized protein.
    
  0.537
LOC110954531
Vav 3 guanine nucleotide exchange factor b.
    
 0.503
ntng1
Netrin g1a.
    
 0.503
ENSAPOP00000024610
Uncharacterized protein.
    
  0.494
ENSAPOP00000028898
Uncharacterized protein.
    
  0.494
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.473
pidd1
P53-induced death domain protein 1.
    
  0.443
mre11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
  0.435
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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