Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110946234Uncharacterized protein. (179 aa)    
Predicted Functional Partners:
rps15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.790
nbr1
NBR1 autophagy cargo receptor a.
    
 0.749
gtf2h1
General transcription factor IIH, polypeptide 1.
    
   0.746
LOC110959869
General transcription factor IIH subunit.
    
   0.746
rptor
Regulatory associated protein of MTOR, complex 1.
    
 
 0.677
LOC110968112
Nuclear transcription factor, X-box binding-like 1.
   
   0.655
nfx1
Nuclear transcription factor, X-box binding 1.
   
   0.655
rpl18a
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 
 0.654
mlst8
MTOR associated protein, LST8 homolog (S. cerevisiae).
    
 
 0.646
rpl21
Ribosomal protein L21.
   
   0.630
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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