Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110946223Syntaphilin a. (528 aa)    
Predicted Functional Partners:
ENSAPOP00000033046
Extra spindle pole bodies like 1, separase.
     
  0.661
LOC110961175
Si:dkey-28e7.3.
      
 0.660
smc3
Structural maintenance of chromosomes protein.
     
  0.485
LOC110948719
RAD21 cohesin complex component a.
     
  0.433
LOC110967977
Rad21_Rec8 domain-containing protein.
     
  0.433
ENSAPOP00000022986
Rad21_Rec8_N domain-containing protein.
     
  0.433
LOC110968057
RAD21 cohesin complex component b.
     
  0.433
LOC110952248
Trafficking protein, kinesin binding 2.
      
 0.425
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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