Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000003103C-type lectin domain-containing protein. (181 aa)    
Predicted Functional Partners:
ENSAPOP00000010144
Fibronectin type-III domain-containing protein.
    
  0.800
tnn
Tenascin N.
    
  0.686
LOC110957541
Tenascin C.
    
  0.639
tnr
Tenascin R (restrictin, janusin).
    
  0.639
ENSAPOP00000026105
Uncharacterized protein.
    
  0.639
LOC110953303
Zmp:0000000846.
    
  0.639
ENSAPOP00000034394
Fibrinogen C-terminal domain-containing protein.
    
  0.639
ripk4
Receptor-interacting serine-threonine kinase 4.
    
  0.521
LOC110969783
Uncharacterized protein.
    
  0.508
ENSAPOP00000034208
Fibrinogen C-terminal domain-containing protein.
    
  0.508
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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