STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110959348Coiled-coil domain containing 80 like 2. (449 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.912
ENSAPOP00000019165
Fras1 related extracellular matrix 1b.
    
 0.731
frem1
Fras1 related extracellular matrix 1a.
    
 0.731
ENSAPOP00000009286
Uncharacterized protein.
    
 0.716
ENSAPOP00000031368
Uncharacterized protein.
    
 0.716
gle1
GLE1 RNA export mediator.
    
 0.695
rps21
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
  0.671
LOC110964394
RAN binding protein 2.
   
 
  0.647
LOC110945380
Death domain-containing protein.
    
 0.640
arl6ip1
ADP-ribosylation factor-like 6 interacting protein 1.
   
   0.636
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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