Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110959348Coiled-coil domain containing 80 like 2. (449 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.779
ENSAPOP00000019165
Fras1 related extracellular matrix 1b.
    
 0.714
frem1
Fras1 related extracellular matrix 1a.
    
 0.714
ENSAPOP00000016008
PDZ domain-containing protein.
     
  0.711
RIMS2
Regulating synaptic membrane exocytosis 2.
     
  0.711
ENSAPOP00000009286
Uncharacterized protein.
    
 0.694
ENSAPOP00000031368
Uncharacterized protein.
    
 0.694
LOC110964394
RAN binding protein 2.
    
  0.660
ENSAPOP00000013404
Collagen, type V, alpha 2a.
    
 0.642
rps21
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
  0.598
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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