Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000003115Uncharacterized protein. (431 aa)    
Predicted Functional Partners:
ENSAPOP00000003062
Uncharacterized protein.
 
   
  0.910
ENSAPOP00000022533
Coiled-coil domain containing 28A.
    
 0.574
ENSAPOP00000030863
Intersectin 2a.
   
 0.529
LOC110950796
Intersectin 2b.
   
 0.529
LOC110967329
DCC netrin 1 receptor.
    
 0.513
NEO1
Neogenin 1.
    
 0.513
ENSAPOP00000027846
Ig-like domain-containing protein.
    
 0.513
LOC110971131
Neogenin_C domain-containing protein.
    
 0.513
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.509
arhgap1
Uncharacterized protein.
      
 0.504
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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