Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lrp12Low density lipoprotein receptor-related protein 12. (675 aa)    
Predicted Functional Partners:
lrpap1
Low density lipoprotein receptor-related protein associated protein 1.
    
 0.722
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.699
mst1r
Macrophage stimulating 1 receptor b.
    
  0.699
LOC110972771
Uncharacterized protein.
    
  0.699
RELN
Reelin.
    
 0.653
ENSAPOP00000030863
Intersectin 2a.
    
 0.647
LOC110950796
Intersectin 2b.
    
 0.647
ENSAPOP00000001105
Zgc:112285; Belongs to the peptidase S1 family.
    
 0.629
corin
Corin, serine peptidase.
    
 0.629
ENSAPOP00000003678
Uncharacterized protein.
   
 0.608
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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