STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110969578Nuclear receptor subfamily 5, group A, member 5. (543 aa)    
Predicted Functional Partners:
nr0b2
Nuclear receptor subfamily 0, group B, member 2a.
   
0.693
LOC110964673
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.648
LOC110960747
Potassium channel tetramerization domain containing 2.
    
 0.648
ube2i
Ubiquitin-conjugating enzyme E2Ia; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.648
nr1h4
Nuclear receptor subfamily 1, group H, member 4.
   
0.647
LOC110962672
Nuclear receptor subfamily 1, group H, member 5.
   
0.599
ENSAPOP00000002060
Nuclear receptor coactivator 2.
    
 0.598
ENSAPOP00000002624
Uncharacterized protein.
    
 0.598
arntl
Aryl hydrocarbon receptor nuclear translocator-like 1a.
    
 0.598
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
    
 0.598
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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