STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000003246Zinc finger GATA like protein 1. (384 aa)    
Predicted Functional Partners:
nfyb
Nuclear transcription factor Y, beta a.
    
 
 0.734
srf
MADS-box domain-containing protein.
    
 0.727
SRF
Serum response factor.
    
 0.727
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.708
tbpl2
TATA box binding protein like 2.
   
 0.681
ENSAPOP00000017354
Uncharacterized protein.
   
 0.681
tbp
TATA box binding protein.
   
 0.681
ENSAPOP00000024610
Uncharacterized protein.
    
 0.679
ENSAPOP00000028898
Uncharacterized protein.
    
 0.679
LOC110950591
Zgc:163014.
    
 0.678
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.