Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
neurod4Neuronal differentiation 4. (325 aa)    
Predicted Functional Partners:
ENSAPOP00000005836
Uncharacterized protein.
    
 0.613
hes1
Hairy-related 6.
    
 0.609
HES2
Hes family bHLH transcription factor 2, tandem duplicate 1.
   
 0.605
LOC110970525
Hairy-related 12.
    
 0.602
ascl1
Achaete-scute family bHLH transcription factor 1a.
   
 
 0.596
ENSAPOP00000004334
Uncharacterized protein.
    
 
 0.595
LOC110967144
Transcription factor 3a.
    
 
 0.595
LOC110949229
Transcription factor 3b.
    
 
 0.595
ENSAPOP00000030307
Uncharacterized protein.
    
 
 0.595
tcf12
Transcription factor 12.
    
 
 0.595
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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