STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
neurod4Neuronal differentiation 4. (325 aa)    
Predicted Functional Partners:
LOC110970525
Hairy-related 12.
   
 0.599
HES2
Hes family bHLH transcription factor 2, tandem duplicate 1.
   
 0.598
HES2-2
Hes family bHLH transcription factor 2, tandem duplicate 1.
   
 0.571
ENSAPOP00000005836
Uncharacterized protein.
    
 0.568
ENSAPOP00000004334
Uncharacterized protein.
    
 
 0.564
LOC110967144
Transcription factor 3a.
    
 
 0.564
LOC110949229
Transcription factor 3b.
    
 
 0.564
LOC110950375
BHLH domain-containing protein.
    
 
 0.564
ENSAPOP00000030307
Uncharacterized protein.
    
 
 0.564
tcf12
Transcription factor 12.
    
 
 0.564
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.