ENSAPOP00000003283 protein (Acanthochromis polyacanthus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSAPOP00000003283

Uncharacterized protein. (107 aa)

Predicted Functional Partners:

ndufs2

0.999

ndufv2

0.999

ndufs7

0.999

ndufv1

0.999

ndufs3

0.999

ndufs4

0.998

NDUFS8

0.998

LOC110969830

0.998

LOC110948175

0.998

ndufab1

0.997

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPOP00000003283	LOC110948175	ENSAPOP00000003283	ENSAPOP00000024702	Uncharacterized protein.	Uncharacterized protein.	0.998
ENSAPOP00000003283	LOC110969830	ENSAPOP00000003283	ENSAPOP00000014163	Uncharacterized protein.	Heme-binding protein soul4.	0.998
ENSAPOP00000003283	NDUFS8	ENSAPOP00000003283	ENSAPOP00000009160	Uncharacterized protein.	NADH:ubiquinone oxidoreductase core subunit S8.	0.998
ENSAPOP00000003283	ndufab1	ENSAPOP00000003283	ENSAPOP00000006298	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.997
ENSAPOP00000003283	ndufs2	ENSAPOP00000003283	ENSAPOP00000006470	Uncharacterized protein.	NADH:ubiquinone oxidoreductase core subunit S2; Belongs to the complex I 49 kDa subunit family.	0.999
ENSAPOP00000003283	ndufs3	ENSAPOP00000003283	ENSAPOP00000025776	Uncharacterized protein.	NADH:ubiquinone oxidoreductase core subunit S3; Belongs to the complex I 30 kDa subunit family.	0.999
ENSAPOP00000003283	ndufs4	ENSAPOP00000003283	ENSAPOP00000004581	Uncharacterized protein.	NADH:ubiquinone oxidoreductase subunit S4.	0.998
ENSAPOP00000003283	ndufs7	ENSAPOP00000003283	ENSAPOP00000018689	Uncharacterized protein.	NADH:ubiquinone oxidoreductase core subunit S7; Belongs to the complex I 20 kDa subunit family.	0.999
ENSAPOP00000003283	ndufv1	ENSAPOP00000003283	ENSAPOP00000021927	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.999
ENSAPOP00000003283	ndufv2	ENSAPOP00000003283	ENSAPOP00000013475	Uncharacterized protein.	NADH:ubiquinone oxidoreductase core subunit V2.	0.999
LOC110948175	ENSAPOP00000003283	ENSAPOP00000024702	ENSAPOP00000003283	Uncharacterized protein.	Uncharacterized protein.	0.998
LOC110948175	LOC110969830	ENSAPOP00000024702	ENSAPOP00000014163	Uncharacterized protein.	Heme-binding protein soul4.	0.986
LOC110948175	ndufab1	ENSAPOP00000024702	ENSAPOP00000006298	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.996
LOC110948175	ndufs2	ENSAPOP00000024702	ENSAPOP00000006470	Uncharacterized protein.	NADH:ubiquinone oxidoreductase core subunit S2; Belongs to the complex I 49 kDa subunit family.	0.999
LOC110948175	ndufs3	ENSAPOP00000024702	ENSAPOP00000025776	Uncharacterized protein.	NADH:ubiquinone oxidoreductase core subunit S3; Belongs to the complex I 30 kDa subunit family.	0.999
LOC110948175	ndufs4	ENSAPOP00000024702	ENSAPOP00000004581	Uncharacterized protein.	NADH:ubiquinone oxidoreductase subunit S4.	0.998
LOC110948175	ndufs7	ENSAPOP00000024702	ENSAPOP00000018689	Uncharacterized protein.	NADH:ubiquinone oxidoreductase core subunit S7; Belongs to the complex I 20 kDa subunit family.	0.999
LOC110948175	ndufv1	ENSAPOP00000024702	ENSAPOP00000021927	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.999
LOC110948175	ndufv2	ENSAPOP00000024702	ENSAPOP00000013475	Uncharacterized protein.	NADH:ubiquinone oxidoreductase core subunit V2.	0.999
LOC110969830	ENSAPOP00000003283	ENSAPOP00000014163	ENSAPOP00000003283	Heme-binding protein soul4.	Uncharacterized protein.	0.998