Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110952957C2H2-type domain-containing protein. (1413 aa)    
Predicted Functional Partners:
ddx10
RNA helicase.
   
 0.768
SUGP1
SURP and G-patch domain containing 1.
    
 0.745
nol6
Nucleolar protein 6.
    
 
 0.700
bysl
Bystin-like.
    
 
 0.697
rrp36
Ribosomal RNA processing 36.
   
   0.697
ENSAPOP00000007743
Uncharacterized protein.
    
   0.692
nom1
Nucleolar protein with MIF4G domain 1.
    
   0.692
imp3
IMP U3 small nucleolar ribonucleoprotein 3.
    
   0.692
utp3
UTP3 small subunit processome component.
   
   0.692
nop14
NOP14 nucleolar protein homolog (yeast).
    
   0.692
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.