STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr11WD repeat domain 11. (1243 aa)    
Predicted Functional Partners:
trappc11
Trafficking protein particle complex 11.
   
    0.786
fam91a1
Family with sequence similarity 91 member A1.
     
 0.765
cunh17orf75
Zgc:153240.
    
 
 0.763
naa40
N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae).
    
   0.715
ubxn7
UBX domain-containing protein 7.
   
   0.694
mtr
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.655
lamtor1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
  0.635
ENSAPOP00000024705
Ras homolog family member H.
    
  0.611
rhoq
Ras homolog family member Q.
    
  0.611
LOC110953934
Charged multivesicular body protein 6a.
    
 
 0.598
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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