Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc29a4Solute carrier family 29 member 4. (467 aa)    
Predicted Functional Partners:
tnrc18
Trinucleotide repeat containing 18.
      
 0.674
LOC110955751
Survival of motor neuron 1, telomeric.
      
 0.650
LOC110962160
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta.
    
 
 0.638
slc46a2
Solute carrier family 46 member 2.
      
 0.608
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.599
LOC110952964
NAC alpha domain containing.
      
 0.594
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.593
slc18a2
Solute carrier family 18 member 2.
    
 
 0.581
SLC18A1
Solute carrier family 18 member A1.
    
 
 0.581
timm17b
Translocase of inner mitochondrial membrane 17 homolog B (yeast).
      
 0.564
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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