Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pard3Par-3 family cell polarity regulator alpha, b. (1201 aa)    
Predicted Functional Partners:
LOC110963603
Par-6 family cell polarity regulator alpha.
   
 0.991
prkci
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.981
prkcz
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.981
pard6b
Par-6 partitioning defective 6 homolog beta (C. elegans).
   
 0.973
pard6g
Par-6 family cell polarity regulator gamma b.
   
 0.970
LOC110967388
Junctional adhesion molecule 3b.
    
 0.961
jam3
Junctional adhesion molecule 3a.
    
 0.961
jam2
Junctional adhesion molecule 2a.
    
  0.954
LOC110961879
T cell lymphoma invasion and metastasis 1a.
    
 0.929
LOC110947878
T cell lymphoma invasion and metastasis 1b.
    
 0.929
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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