STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000003391Uncharacterized protein. (420 aa)    
Predicted Functional Partners:
il1b
Interleukin-1.
    
 0.678
tnfrsf13b
TNFR-Cys domain-containing protein.
    
 0.667
LOC110946044
Uncharacterized protein.
   
  0.661
LOC110962974
Uncharacterized protein.
    
  0.655
ENSAPOP00000022883
Uncharacterized protein.
    
  0.655
ENSAPOP00000022917
Uncharacterized protein.
    
  0.655
ENSAPOP00000011830
RP1 axonemal microtubule associated.
   
 0.607
ENSAPOP00000031220
Uncharacterized protein.
   
 0.607
ENSAPOP00000026201
CD59 molecule (CD59 blood group).
    
  0.605
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.589
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.