Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110954965Uncharacterized protein. (594 aa)    
Predicted Functional Partners:
PUF60
Poly-U binding splicing factor b.
    
 
 0.671
ENSAPOP00000018752
RRM domain-containing protein.
    
 
 0.671
luc7l3
LUC7-like 3 pre-mRNA splicing factor.
   
  
 0.626
rrp9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
      
 0.595
stard7
StAR-related lipid transfer (START) domain containing 7.
    
   0.586
lmf1
Lipase maturation factor; Involved in the maturation of specific proteins in the endoplasmic reticulum; Belongs to the lipase maturation factor family.
      
 0.562
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
    
 
 0.507
LOC110948885
Zgc:158803.
   
  
 0.474
luc7l
LUC7-like (S. cerevisiae).
   
  
 0.474
ENSAPOP00000014648
Uncharacterized protein.
      
 0.443
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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