Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SLC38A8Solute carrier family 38 member 8. (431 aa)    
Predicted Functional Partners:
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.787
lamtor5
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.
    
 0.765
lamtor1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.747
lamtor4
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4.
    
 0.745
LOC110967465
Ras-related GTP binding A.
    
 0.681
svopl
SVOP-like.
      
 0.658
bloc1s3
Biogenesis of lysosome-related organelles complex 1 subunit 3; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO). Belongs to the BLOC1S3 family.
      
 0.654
trpm2
Transient receptor potential cation channel, subfamily M, member 2.
     
 0.589
LOC110970726
Solute carrier family 7 member 3a.
      
 0.559
slc38a9
Solute carrier family 38 member 9.
      
 0.555
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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