Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ATG5Autophagy protein 5; Involved in autophagic vesicle formation. (193 aa)    
Predicted Functional Partners:
atg12
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
   
 0.996
atg3
Autophagy-related protein 3.
   
 0.993
atg16l1
ATG16 autophagy related 16-like 1 (S. cerevisiae).
   
 0.990
ENSAPOP00000004809
ATG7_N domain-containing protein.
    
 0.987
LOC110968049
WD_REPEATS_REGION domain-containing protein.
   
 0.979
LOC110967018
Uncharacterized protein.
    
 0.963
atg10
ATG10 autophagy related 10 homolog (S. cerevisiae).
    
 0.960
map1lc3a
Microtubule-associated protein 1 light chain 3 alpha.
    
 0.953
LOC110969784
Microtubule-associated protein 1 light chain 3 beta.
    
 0.953
gabarap
GABA(A) receptor-associated protein b.
    
 0.948
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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