STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110960543Dynein light chain. (89 aa)    
Predicted Functional Partners:
DYNC1I1
Dynein cytoplasmic 1 intermediate chain 1.
    
 0.970
dynlrb1
Dynein light chain roadblock.
   
 0.970
LOC110964471
Dynein, cytoplasmic 1, intermediate chain 2a.
    
 0.970
DYNLRB2
Dynein light chain roadblock-type 2.
   
 0.970
dynlt1
Dynein, light chain, Tctex-type 1.
   
 0.962
DYNLT3
Dynein, light chain, Tctex-type 3.
   
 0.955
LOC110957783
Uncharacterized protein.
   
 0.955
wdr60
WD repeat domain 60.
    
 0.943
LOC110966849
Dynein, cytoplasmic 1, intermediate chain 2b.
    
 0.939
dync2li1
Dynein, cytoplasmic 2, light intermediate chain 1.
    
 0.937
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.