STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpkowG patch domain and KOW motifs. (509 aa)    
Predicted Functional Partners:
dhx38
DEAH (Asp-Glu-Ala-His) box polypeptide 38.
   
 0.985
cwc27
CWC27 spliceosome associated cyclophilin.
    
 0.979
dhx16
DEAH (Asp-Glu-Ala-His) box polypeptide 16.
    
 0.977
ENSAPOP00000027184
Uncharacterized protein.
    
 0.977
ENSAPOP00000027245
annotation not available
    
 0.977
cwc22
CWC22 spliceosome associated protein homolog.
    
 0.975
bud13
BUD13 homolog.
   
 
 0.972
rnf113a
Ring finger protein 113A.
   
  0.972
ppil2
Peptidylprolyl isomerase (cyclophilin)-like 2.
    
 0.970
prpf8
Pre-mRNA processing factor 8.
    
 
 0.943
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.