Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gpkowG patch domain and KOW motifs. (509 aa)    
Predicted Functional Partners:
dhx38
DEAH (Asp-Glu-Ala-His) box polypeptide 38.
   
 0.993
bud13
BUD13 homolog.
   
 
 0.993
cwc22
CWC22 spliceosome associated protein homolog.
    
 0.982
dhx16
DEAH (Asp-Glu-Ala-His) box polypeptide 16.
    
 0.981
ENSAPOP00000027184
Uncharacterized protein.
    
 0.981
ENSAPOP00000027245
annotation not available
    
 0.981
ppil4
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
   
 0.979
prpf4
PRP4 pre-mRNA processing factor 4 homolog (yeast).
   
 0.976
cwc27
CWC27 spliceosome associated cyclophilin.
    
 0.971
prpf8
Pre-mRNA processing factor 8.
    
 
 0.955
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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