STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSHZ1Teashirt zinc finger homeobox 1. (1191 aa)    
Predicted Functional Partners:
meis2
Meis homeobox 2a.
    
 0.696
LOC110963635
Meis homeobox 1 b.
    
 0.696
LOC110965248
Meis_PKNOX_N domain-containing protein.
    
 0.696
LOC110963536
Homeobox domain-containing protein.
    
 0.663
LOC110957182
Iroquois homeobox 1a.
    
 0.663
LOC110948314
Iroquois homeobox 7.
    
 0.641
LOC110965966
Homeobox domain-containing protein.
    
 0.641
LOC110963537
Iroquois homeobox 4b.
    
 0.641
mkx
Mohawk homeobox a.
    
 0.641
LOC110960008
TGFB-induced factor homeobox 1.
    
 0.641
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.