STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110967099Nanos-type domain-containing protein; Belongs to the nanos family. (228 aa)    
Predicted Functional Partners:
cnot1
CCR4-NOT transcription complex, subunit 1.
    
 
 0.941
pum2
Pumilio RNA-binding family member 2.
   
 
 0.893
ENSAPOP00000013017
Uncharacterized protein.
   
 
 0.893
pum1
Pumilio RNA-binding family member 1.
   
 
 0.893
edar
Ectodysplasin A receptor.
    
 0.848
samd4a
Sterile alpha motif domain containing 4A.
    
 
 0.624
samd4b
Sterile alpha motif domain containing 4B.
    
 
 0.624
piwil1
Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.
   
 
 0.603
piwil2
Piwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family.
   
 
 0.603
LOC110957540
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
  0.589
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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