STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110950504IF rod domain-containing protein; Belongs to the intermediate filament family. (456 aa)    
Predicted Functional Partners:
pdc
Phosducin domain-containing protein.
   
  
 0.884
LOC110962521
Phosducin b.
   
  
 0.884
PRPH
Peripherin; Belongs to the intermediate filament family.
    
 
0.777
LOC110969142
Guanylate kinase 1b.
   
  0.735
ENSAPOP00000007453
Asp-B-Hydro_N domain-containing protein.
   
 
 0.727
ENSAPOP00000024610
Uncharacterized protein.
   
  0.691
ENSAPOP00000028898
Uncharacterized protein.
   
  0.691
LOC110956434
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
 0.676
LOC110952230
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
 0.676
LOC110967938
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
 0.676
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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