STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110951236Uncharacterized protein. (336 aa)    
Predicted Functional Partners:
ENSAPOP00000024610
Uncharacterized protein.
    
  0.775
ENSAPOP00000028898
Uncharacterized protein.
    
  0.775
C1QC
Complement C1q C chain.
   
  0.637
rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.580
tep1
Uncharacterized protein.
    
  0.568
mlst8
MTOR associated protein, LST8 homolog (S. cerevisiae).
    
  0.561
det1
DET1 partner of COP1 E3 ubiquitin ligase.
    
  0.561
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.532
rps27a
Ribosomal protein S27a.
    
  0.508
setdb1
SET domain bifurcated histone lysine methyltransferase 1b.
    
  0.500
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.