LOC110962856 protein (Acanthochromis polyacanthus)

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

LOC110962856

Usher syndrome 1Ga (autosomal recessive). (472 aa)

Predicted Functional Partners:

ush1c

0.976

LOC110967763

0.742

LOC110969657

0.742

ENSAPOP00000032686

0.716

LOC110962861

0.691

traf7

0.658

ENSAPOP00000006247

0.642

LOC110955930

0.637

LOC110964760

0.637

ENSAPOP00000012574

0.637

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPOP00000006247	ENSAPOP00000032686	ENSAPOP00000006247	ENSAPOP00000032686	Uncharacterized protein.	Cadherin-related 23.	0.799
ENSAPOP00000006247	LOC110962856	ENSAPOP00000006247	ENSAPOP00000003591	Uncharacterized protein.	Usher syndrome 1Ga (autosomal recessive).	0.642
ENSAPOP00000006247	LOC110967763	ENSAPOP00000006247	ENSAPOP00000019896	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.577
ENSAPOP00000006247	LOC110969657	ENSAPOP00000006247	ENSAPOP00000020536	Uncharacterized protein.	Myosin VIIAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.577
ENSAPOP00000006247	traf7	ENSAPOP00000006247	ENSAPOP00000014100	Uncharacterized protein.	TNF receptor-associated factor 7.	0.508
ENSAPOP00000006247	ush1c	ENSAPOP00000006247	ENSAPOP00000017986	Uncharacterized protein.	Usher syndrome 1C.	0.909
ENSAPOP00000012574	ENSAPOP00000032686	ENSAPOP00000012574	ENSAPOP00000032686	Uncharacterized protein.	Cadherin-related 23.	0.449
ENSAPOP00000012574	LOC110962856	ENSAPOP00000012574	ENSAPOP00000003591	Uncharacterized protein.	Usher syndrome 1Ga (autosomal recessive).	0.637
ENSAPOP00000012574	ush1c	ENSAPOP00000012574	ENSAPOP00000017986	Uncharacterized protein.	Usher syndrome 1C.	0.747
ENSAPOP00000032686	ENSAPOP00000006247	ENSAPOP00000032686	ENSAPOP00000006247	Cadherin-related 23.	Uncharacterized protein.	0.799
ENSAPOP00000032686	ENSAPOP00000012574	ENSAPOP00000032686	ENSAPOP00000012574	Cadherin-related 23.	Uncharacterized protein.	0.449
ENSAPOP00000032686	LOC110955930	ENSAPOP00000032686	ENSAPOP00000002024	Cadherin-related 23.	Myosin X, like 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.449
ENSAPOP00000032686	LOC110962856	ENSAPOP00000032686	ENSAPOP00000003591	Cadherin-related 23.	Usher syndrome 1Ga (autosomal recessive).	0.716
ENSAPOP00000032686	LOC110964760	ENSAPOP00000032686	ENSAPOP00000002858	Cadherin-related 23.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.449
ENSAPOP00000032686	LOC110967763	ENSAPOP00000032686	ENSAPOP00000019896	Cadherin-related 23.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.756
ENSAPOP00000032686	LOC110969657	ENSAPOP00000032686	ENSAPOP00000020536	Cadherin-related 23.	Myosin VIIAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.756
ENSAPOP00000032686	ush1c	ENSAPOP00000032686	ENSAPOP00000017986	Cadherin-related 23.	Usher syndrome 1C.	0.986
LOC110955930	ENSAPOP00000032686	ENSAPOP00000002024	ENSAPOP00000032686	Myosin X, like 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Cadherin-related 23.	0.449
LOC110955930	LOC110962856	ENSAPOP00000002024	ENSAPOP00000003591	Myosin X, like 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Usher syndrome 1Ga (autosomal recessive).	0.637
LOC110955930	LOC110964760	ENSAPOP00000002024	ENSAPOP00000002858	Myosin X, like 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.865