Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110962861Otopetrin 2. (593 aa)    
Predicted Functional Partners:
LOC110962856
Usher syndrome 1Ga (autosomal recessive).
      
 0.691
tmem128
Transmembrane protein 107.
      
 0.589
HID1
HID1 domain containing.
      
 0.496
LOC110963478
HID1 domain containing b.
      
 0.496
ush1g
Usher syndrome 1Gb (autosomal recessive).
      
 0.494
SLC26A9
Solute carrier family 26 member 9; DIDS- and thiosulfate- sensitive anion exchanger mediating chloride, sulfate and oxalate transport. Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
      
 0.490
LOC110948817
Uncharacterized protein.
   
  
 0.419
anks4b
Ankyrin repeat and sterile alpha motif domain containing 4B.
      
 0.418
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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