LOC110949433 protein (Acanthochromis polyacanthus)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

LOC110949433

Uncharacterized protein. (218 aa)

Predicted Functional Partners:

ENSAPOP00000013767

0.938

LOC110951181

0.886

sytl1

0.886

sytl2

0.879

LOC110964817

0.862

LOC110952008

0.851

sytl5

0.831

ENSAPOP00000025732

0.831

sytl4

0.831

madd

0.777

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPOP00000013767	LOC110949433	ENSAPOP00000013767	ENSAPOP00000003622	RabBD domain-containing protein.	Uncharacterized protein.	0.938
ENSAPOP00000013767	LOC110951181	ENSAPOP00000013767	ENSAPOP00000005417	RabBD domain-containing protein.	Uncharacterized protein.	0.624
ENSAPOP00000013767	sytl1	ENSAPOP00000013767	ENSAPOP00000018012	RabBD domain-containing protein.	Synaptotagmin-like 1.	0.624
ENSAPOP00000013767	sytl2	ENSAPOP00000013767	ENSAPOP00000015270	RabBD domain-containing protein.	Synaptotagmin-like 2a.	0.624
ENSAPOP00000025732	LOC110949433	ENSAPOP00000025732	ENSAPOP00000003622	RabBD domain-containing protein.	Uncharacterized protein.	0.831
ENSAPOP00000025732	LOC110952008	ENSAPOP00000025732	ENSAPOP00000015674	RabBD domain-containing protein.	Si:ch211-106h4.9.	0.435
LOC110949433	ENSAPOP00000013767	ENSAPOP00000003622	ENSAPOP00000013767	Uncharacterized protein.	RabBD domain-containing protein.	0.938
LOC110949433	ENSAPOP00000025732	ENSAPOP00000003622	ENSAPOP00000025732	Uncharacterized protein.	RabBD domain-containing protein.	0.831
LOC110949433	LOC110951181	ENSAPOP00000003622	ENSAPOP00000005417	Uncharacterized protein.	Uncharacterized protein.	0.886
LOC110949433	LOC110952008	ENSAPOP00000003622	ENSAPOP00000015674	Uncharacterized protein.	Si:ch211-106h4.9.	0.851
LOC110949433	LOC110964817	ENSAPOP00000003622	ENSAPOP00000034590	Uncharacterized protein.	Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.	0.862
LOC110949433	madd	ENSAPOP00000003622	ENSAPOP00000004887	Uncharacterized protein.	MAP-kinase activating death domain.	0.777
LOC110949433	sytl1	ENSAPOP00000003622	ENSAPOP00000018012	Uncharacterized protein.	Synaptotagmin-like 1.	0.886
LOC110949433	sytl2	ENSAPOP00000003622	ENSAPOP00000015270	Uncharacterized protein.	Synaptotagmin-like 2a.	0.879
LOC110949433	sytl4	ENSAPOP00000003622	ENSAPOP00000027440	Uncharacterized protein.	Synaptotagmin-like 4.	0.831
LOC110949433	sytl5	ENSAPOP00000003622	ENSAPOP00000006050	Uncharacterized protein.	Synaptotagmin-like 5.	0.831
LOC110951181	ENSAPOP00000013767	ENSAPOP00000005417	ENSAPOP00000013767	Uncharacterized protein.	RabBD domain-containing protein.	0.624
LOC110951181	LOC110949433	ENSAPOP00000005417	ENSAPOP00000003622	Uncharacterized protein.	Uncharacterized protein.	0.886
LOC110951181	LOC110952008	ENSAPOP00000005417	ENSAPOP00000015674	Uncharacterized protein.	Si:ch211-106h4.9.	0.608
LOC110952008	ENSAPOP00000025732	ENSAPOP00000015674	ENSAPOP00000025732	Si:ch211-106h4.9.	RabBD domain-containing protein.	0.435