Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC110956398Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily. (424 aa)    
Predicted Functional Partners:
LOC110952671
Sorbin and SH3 domain containing 1.
    
  0.928
LOC110969229
Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily.
  
  
 
0.927
flot2
Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily.
  
  
 
0.927
LOC110955044
Sorbin and SH3 domain containing 3.
    
  0.917
sorbs2
Sorbin and SH3 domain containing 2a.
    
  0.916
ENSAPOP00000029107
Uncharacterized protein.
    
  0.916
cav3
Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.
    
 0.819
LOC110965507
Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.
    
 0.819
MPZL3
Myelin protein zero like 3.
    
   0.777
ENSAPOP00000004971
Anillin, actin binding protein.
    
  0.759
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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