Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
imp4IMP U3 small nucleolar ribonucleoprotein 4. (291 aa)    
Predicted Functional Partners:
imp3
IMP U3 small nucleolar ribonucleoprotein 3.
   
 0.999
mphosph10
U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family.
   
 0.999
nop14
NOP14 nucleolar protein homolog (yeast).
   
 0.997
utp18
Uncharacterized protein.
   
 0.997
utp4
UTP4 small subunit processome component.
   
 0.997
noc4l
Nucleolar complex associated 4 homolog.
   
 0.997
nol6
Nucleolar protein 6.
   
 0.996
nol10
Nucleolar protein 10.
   
 0.996
wdr46
WD repeat domain 46.
   
 0.996
rrp7a
Ribosomal RNA processing 7 homolog A.
   
 0.996
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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