Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
spc25SPC25 component of NDC80 kinetochore complex. (242 aa)    
Predicted Functional Partners:
LOC110970961
DUF5595 domain-containing protein.
   
 0.999
nuf2
UF2 component of NDC80 kinetochore complex.
   
 0.999
spc24
SPC24 component of NDC80 kinetochore complex.
   
 0.999
ndc80
NDC80 kinetochore complex component.
   
 0.999
LOC110962428
DSN1 component of MIS12 kinetochore complex.
   
 0.997
nsl1
NSL1 component of MIS12 kinetochore complex.
   
 0.997
mis12
MIS12 kinetochore complex component.
    
 0.996
knl1
Knl1_RWD_C domain-containing protein.
   
 0.988
bub1b
BUB1 mitotic checkpoint serine/threonine kinase Bb.
   
 0.985
ENSAPOP00000014789
BUB1 N-terminal domain-containing protein.
   
 0.985
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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