Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
USP50Ubiquitin specific peptidase 50; Belongs to the peptidase C19 family. (351 aa)    
Predicted Functional Partners:
pycard
PYD and CARD domain containing.
    
   0.836
ENSAPOP00000034381
CARD domain-containing protein.
    
   0.836
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.726
josd1
Josephin domain containing 1.
    
 
 0.712
trip12
Thyroid hormone receptor interactor 12.
    
 
 0.705
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 
 0.697
ENSAPOP00000011937
Uncharacterized protein.
    
   0.673
ENSAPOP00000014068
NACHT domain-containing protein.
    
   0.673
LOC110951226
Uncharacterized protein.
    
   0.673
LOC110955158
Uncharacterized protein.
    
   0.673
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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