STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttc12Tetratricopeptide repeat domain 12. (530 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.950
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 
 0.838
cunh22orf23
Uncharacterized protein.
   
    0.819
tep1
Uncharacterized protein.
   
 0.811
LOC110969591
TSC complex subunit 1b.
  
 0.801
ENSAPOP00000006536
Uncharacterized protein.
  
 0.801
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
  
 0.801
LOC110971164
Uncharacterized protein.
  
 0.801
trap1
TNF receptor-associated protein 1.
  
 0.801
LOC110955499
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
  
 0.801
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.