Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ttc12Tetratricopeptide repeat domain 12. (530 aa)    
Predicted Functional Partners:
ENSAPOP00000003764
Ankyrin repeat and kinase domain containing 1.
   
 
 0.898
nme9
NME/NM23 family member 8; Belongs to the NDK family.
  
 0.881
LOC110961666
Si:ch211-131k2.3.
   
 0.818
ENSAPOP00000002190
Prostaglandin E synthase 3b (cytosolic).
   
 0.815
LOC110958606
Prostaglandin E synthase 3a (cytosolic).
   
 0.815
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.804
LOC110963903
Aha1_N domain-containing protein.
   
 
 0.782
LOC110956652
AHA1, activator of heat shock protein ATPase homolog 1b.
   
 
 0.782
wdhd1
WD repeat and HMG-box DNA binding protein 1.
    
 
 0.762
LOC110969591
TSC complex subunit 1b.
  
 0.759
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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