Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ift20Intraflagellar transport 20 homolog (Chlamydomonas). (132 aa)    
Predicted Functional Partners:
traf3ip1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.999
ENSAPOP00000030983
Uncharacterized protein.
    
 0.999
ift88
Intraflagellar transport 88 homolog.
    
 0.998
ift172
Intraflagellar transport 172.
    
 0.996
hspb11
Zgc:158640.
   
 0.990
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.990
ift74
Intraflagellar transport 74.
    
 0.989
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
   
 0.989
ift81
Intraflagellar transport 81 homolog.
   
 0.989
LOC110955086
Fleer.
    
 0.987
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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