Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110948842Sialidase 3 (membrane sialidase), tandem duplicate 1. (410 aa)    
Predicted Functional Partners:
arsa
Arylsulfatase A.
  
 
 0.934
neu1
Neuraminidase 1.
  
  
0.914
b4galnt1
Beta-1,4 N-acetylgalactosaminyltransferase.
     
 0.902
LOC110949821
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5.
     
 0.902
LOC110954847
Beta-1,4 N-acetylgalactosaminyltransferase.
     
 0.902
LOC110964166
ST3 beta-galactoside alpha-2,3-sialyltransferase 5; Belongs to the glycosyltransferase 29 family.
     
 0.898
LOC110949960
Uncharacterized protein.
     
 0.886
ugt8
UDP glycosyltransferase 8; Belongs to the UDP-glycosyltransferase family.
     
 0.886
ENSAPOP00000004814
Uncharacterized protein.
    
  0.885
ENSAPOP00000019731
Uncharacterized protein.
    
  0.885
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
Server load: low (6%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.