STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stk39Serine threonine kinase 39. (452 aa)    
Predicted Functional Partners:
sec61g
SEC61 translocon gamma subunit.
   
 
 0.943
sec62
SEC62 homolog, preprotein translocation factor.
    
 
 0.942
sec63
SEC63 homolog, protein translocation regulator.
    
 
 0.918
sec61b
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.901
LOC110949172
Plug_translocon domain-containing protein.
    
 
 0.885
LOC110955282
Plug_translocon domain-containing protein.
    
 
 0.885
LOC110958400
Calcium binding protein 39-like.
   
 0.765
LOC110957111
Calcium binding protein 39, like 1.
   
 0.765
cab39
Calcium binding protein 39.
   
 0.765
LOC110963591
A kinase (PRKA) anchor protein 8-like; Belongs to the AKAP95 family.
    
 0.740
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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