LOC110953506 protein (Acanthochromis polyacanthus)

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

Genomic Predictions

gene neighborhood

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[Homology]

Score

LOC110953506

Uncharacterized protein. (242 aa)

Predicted Functional Partners:

atg16l1

0.924

LOC110968049

0.924

LOC110968455

0.873

LOC110954611

0.873

stx5

0.833

trappc8

0.830

rabggtb

0.822

trappc1

0.819

rab33a

0.816

trappc4

0.796

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC110953506	LOC110954611	ENSAPOP00000003810	ENSAPOP00000024810	Uncharacterized protein.	Zgc:101559.	0.873
LOC110953506	LOC110968049	ENSAPOP00000003810	ENSAPOP00000028388	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.924
LOC110953506	LOC110968455	ENSAPOP00000003810	ENSAPOP00000016628	Uncharacterized protein.	RAB33B, member RAS oncogene family a.	0.873
LOC110953506	atg16l1	ENSAPOP00000003810	ENSAPOP00000009094	Uncharacterized protein.	ATG16 autophagy related 16-like 1 (S. cerevisiae).	0.924
LOC110953506	rab33a	ENSAPOP00000003810	ENSAPOP00000004829	Uncharacterized protein.	RAB33A, member RAS oncogene family.	0.816
LOC110953506	rabggtb	ENSAPOP00000003810	ENSAPOP00000019660	Uncharacterized protein.	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	0.822
LOC110953506	stx5	ENSAPOP00000003810	ENSAPOP00000030689	Uncharacterized protein.	Syntaxin 5A; Belongs to the syntaxin family.	0.833
LOC110953506	trappc1	ENSAPOP00000003810	ENSAPOP00000009414	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.819
LOC110953506	trappc4	ENSAPOP00000003810	ENSAPOP00000009673	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.796
LOC110953506	trappc8	ENSAPOP00000003810	ENSAPOP00000001455	Uncharacterized protein.	Trafficking protein particle complex 8.	0.830
LOC110954611	LOC110953506	ENSAPOP00000024810	ENSAPOP00000003810	Zgc:101559.	Uncharacterized protein.	0.873
LOC110954611	LOC110968049	ENSAPOP00000024810	ENSAPOP00000028388	Zgc:101559.	WD_REPEATS_REGION domain-containing protein.	0.967
LOC110954611	LOC110968455	ENSAPOP00000024810	ENSAPOP00000016628	Zgc:101559.	RAB33B, member RAS oncogene family a.	0.873
LOC110954611	atg16l1	ENSAPOP00000024810	ENSAPOP00000009094	Zgc:101559.	ATG16 autophagy related 16-like 1 (S. cerevisiae).	0.967
LOC110954611	rabggtb	ENSAPOP00000024810	ENSAPOP00000019660	Zgc:101559.	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	0.860
LOC110954611	stx5	ENSAPOP00000024810	ENSAPOP00000030689	Zgc:101559.	Syntaxin 5A; Belongs to the syntaxin family.	0.833
LOC110954611	trappc1	ENSAPOP00000024810	ENSAPOP00000009414	Zgc:101559.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.819
LOC110954611	trappc4	ENSAPOP00000024810	ENSAPOP00000009673	Zgc:101559.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.796
LOC110954611	trappc8	ENSAPOP00000024810	ENSAPOP00000001455	Zgc:101559.	Trafficking protein particle complex 8.	0.830
LOC110968049	LOC110953506	ENSAPOP00000028388	ENSAPOP00000003810	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.924