STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110967184RAB11 family interacting protein 5a (class I). (1462 aa)    
Predicted Functional Partners:
LOC110968494
RAB11a, member RAS oncogene family.
    
 0.944
LOC110954587
RAB11a, member RAS oncogene family, like.
    
 0.944
LOC110950716
Uncharacterized protein.
    
 0.941
ENSAPOP00000031699
Uncharacterized protein.
    
 0.941
LOC110966346
Uncharacterized protein.
  
 
0.888
rab11fip2
RAB11 family interacting protein 2 (class I).
    
0.879
LOC110955048
Uncharacterized protein.
    
0.879
LOC110954728
FIP-RBD domain-containing protein.
    
0.852
LOC110957305
EH-domain containing 1a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.828
LOC110954588
RAB25, member RAS oncogene family b.
    
 0.810
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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