Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pno1Partner of NOB1 homolog. (252 aa)    
Predicted Functional Partners:
bysl
Bystin-like.
   
 0.999
ENSAPOP00000025223
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.999
tsr1
TSR1 ribosome maturation factor.
   
 0.994
ltv1
LTV1 ribosome biogenesis factor.
   
 0.990
riok2
RIO kinase 2 (yeast).
   
 0.981
bud23
BUD23 rRNA methyltransferase and ribosome maturation factor.
   
 0.975
aatf
Apoptosis antagonizing transcription factor.
   
 
 0.974
heatr1
HEAT repeat containing 1.
   
 
 0.973
nop14
NOP14 nucleolar protein homolog (yeast).
   
 
 0.971
LOC110964271
PWP2 small subunit processome component.
   
 
 0.967
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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