Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC110955217Tripartite motif containing 46b. (815 aa)    
Predicted Functional Partners:
usp14
Ubiquitin carboxyl-terminal hydrolase.
    
 
 0.566
gas2l3
Growth arrest-specific 2 like 3.
    
   0.505
LOC110955031
Microtubule-associated protein, RP/EB family, member 3b.
    
 0.501
mapre2
Microtubule-associated protein, RP/EB family, member 2.
    
 0.501
LOC110962507
Microtubule-associated protein, RP/EB family, member 3a.
    
 0.501
lrrc41
Uncharacterized protein.
      
 0.490
RNF207
Ring finger protein 207.
      
 0.466
sting1
Transmembrane protein 173.
    
 0.457
LOC110967018
Uncharacterized protein.
    
 0.455
ENSAPOP00000006159
Uncharacterized protein.
     
  0.453
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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