Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110962842Oligodendrocyte lineage transcription factor 2. (273 aa)    
Predicted Functional Partners:
LOC110961185
SRY-box transcription factor 10.
   
 
 0.877
LOC110950077
NK2 homeobox 2a.
   
 0.778
LOC110951614
NK2 homeobox 2b.
   
 0.778
LOC110952004
Glial fibrillary acidic protein; Belongs to the intermediate filament family.
   
 
 0.741
LOC110966742
NK6 homeobox 1.
   
  
 0.713
LOC110970525
Hairy-related 12.
    
 0.674
elavl3
ELAV-like protein; Belongs to the RRM elav family.
   
  
 0.667
mnx1
Motor neuron and pancreas homeobox 1.
   
 
 0.656
CNP
2',3'-cyclic nucleotide 3' phosphodiesterase.
      
 0.654
irx3
Iroquois homeobox 3a.
    
 
 0.646
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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