STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110959321Integrin beta; Belongs to the integrin beta chain family. (825 aa)    
Predicted Functional Partners:
itga8
Integrin, alpha 8; Belongs to the integrin alpha chain family.
   
 0.957
LOC110953917
Integrin, alpha 5 (fibronectin receptor, alpha polypeptide); Belongs to the integrin alpha chain family.
   
 0.954
LOC110959651
Vitronectin b.
    
 0.943
vtn
Vitronectin a.
    
 0.943
LOC110950824
Integrin beta; Belongs to the integrin beta chain family.
  
  
 
0.929
LOC110969814
Thrombospondin 1b.
   
 0.926
LOC110963503
Thrombospondin 1a.
   
 0.926
thbs2
Thrombospondin 2a.
   
 0.926
LOC110951273
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
   
 0.922
LOC110958739
Tyrosine-protein kinase.
   
 0.921
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.