Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
mtrf1lMitochondrial translational release factor 1-like. (421 aa)    
Predicted Functional Partners:
hemk1
HemK methyltransferase family member 1.
  
 
 0.950
fbxw11
F-box and WD repeat domain containing 11a.
    
 0.917
n6amt1
N-6 adenine-specific DNA methyltransferase 1.
  
 
 0.903
cul1
Cullin 1b; Belongs to the cullin family.
    
  0.895
mrpl58
RF_PROK_I domain-containing protein.
  
 0.895
cdc16
Cell division cycle 16 homolog (S. cerevisiae).
    
  0.882
anapc2
Anaphase promoting complex subunit 2; Belongs to the cullin family.
    
  0.880
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
 
 0.879
cdc20b
Uncharacterized protein.
    
 0.867
cdc20
Cell division cycle 20 homolog.
    
 0.867
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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