Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dnajc28DnaJ (Hsp40) homolog, subfamily C, member 28. (394 aa)    
Predicted Functional Partners:
atp5pb
ATP synthase peripheral stalk-membrane subunit b.
    
   0.940
ENSAPOP00000003310
Uncharacterized protein.
    
   0.825
atp5f1b
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
   0.825
atp5me
ATP synthase membrane subunit ea.
    
   0.794
ENSAPOP00000016696
Uncharacterized protein.
    
   0.794
atp5pf
ATP synthase-coupling factor 6, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain; Belongs to the eukaryotic ATPase subunit F6 family.
    
   0.770
theg
Theg spermatid protein.
      
 0.706
dnajc9
DnaJ (Hsp40) homolog, subfamily C, member 9.
      
 0.685
dnajc14
DnaJ (Hsp40) homolog, subfamily C, member 14.
      
 0.673
TMEM50B
Transmembrane protein 50B.
      
 0.661
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
Server load: low (4%) [HD]