Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110970095Apolipoprotein A-IV a. (254 aa)    
Predicted Functional Partners:
LOC110953836
Uncharacterized protein.
  
 
0.938
ENSAPOP00000023422
Apolipoprotein A-IV a.
  
  
 
0.937
ENSAPOP00000012078
Apolipoprotein Eb.
  
 
 
0.931
ENSAPOP00000029121
Uncharacterized protein.
  
 
0.931
ENSAPOP00000003678
Uncharacterized protein.
  
 
 
0.889
LOC110955230
Zgc:162608.
     
  0.873
LOC110959060
Uncharacterized protein.
   
 0.719
LOC110953839
Uncharacterized protein.
     
 0.673
apob
Apolipoprotein Ba.
   
 0.626
ENSAPOP00000010570
Vitellogenin domain-containing protein.
   
 0.626
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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